Bibliografia UJ CM

1/22
Małgorzata Gadzała, Dawid Dułak, Barbara Kalinowska, Zbigniew Baster, Michał Bryliński, Leszek Konieczny, Mateusz Banach, Irena Roterman.
The aqueous environment as an active participant in the protein folding process.
Journal of Molecular Graphics & Modelling
2019 : Vol. 87, s. 227-239, il., bibliogr. 73 poz., abstr.
Autor korespondencyjny: Dawid Dułak, Irena Roterman.
Open Access Creative Commons Attribution License CC-BY-NC-ND 4.0.
p-ISSN: 1093-3263
AZ
ORG
AIF
IF: 2.079
Adres url:
Streszczenie w PubMed:
2/22
Mateusz Banach, Barbara Kalinowska, Leszek Konieczny, Irena Roterman.
Possible mechanism of amyloidogenesis of V domains.
W: Self-Assembled Molecules - New Kind of Protein Ligands : Supramolecular Ligands.
Editors: Irena Roterman, Leszek Konieczny.
New York, NY : Springer Berlin Heidelberg, 2018.
s. 77-100 : il. bibliogr. 31 poz.
Open Access Creative Commons Attribution License CC-BY 4.0.
Autor korespondencyjny: Mateusz Banach.
Library of Congress Control Numer: 2017953533.
p-ISBN: 978-3-319-65638-0
e-ISBN: 978-3-319-65639-7
RMZ
ORG
RMZ
Adres url: *
DOI:
3/22
Barbara Kalinowska, Mateusz Banach, Zdzisław Wiśniowski, Leszek Konieczny, Irena Roterman.
Is the hydrophobic core a universal structural element in proteins?
Journal of Molecular Modeling
2017 : Vol. 23, nr 7 art. no. 203, s. 1-16, il., bibliogr. 43 poz., abstr.
Open Access Creative Commons Attribution License CC-BY 4.0.
Autor korespondencyjny: Irena Roterman.
p-ISSN: 1610-2940
AZ
ORG
AIF
IF: 1.507
Adres url:
Streszczenie w PubMed:
4/22
Mateusz Banach, Zdzisław Wiśniowski, Barbara Kalinowska, Leszek Konieczny, Irena Roterman.
The variability of protein structure with respect to the hydrophobic core.
Bio-Algorithms and Med-Systems
2017 : Vol. 13, nr 2, s. 63-68, il., bibliogr. 21 poz., abstr.
Autor korespondencyjny: Irena Roterman.
p-ISSN: 1895-9091
AP
ORG
KBN
Adres url:
5/22
Irena Roterman, Mateusz Banach, Barbara Kalinowska, Leszek Konieczny.
Influence of the Aqueous Environment on Protein Structure - A Plausible Hypothesis Concerning the Mechanism of Amyloidogenesis.
Entropy
2016 : Vol. 18, nr 10 art. no. 351, s. 1-31, il., bibliogr. 86 poz., abstr.
Open Access Creative Commons Attribution License CC-BY 4.0.
p-ISSN: 1099-4300
AZ
ORG
AIF
IF: 1.821
Adres url:
6/22
Mateusz Banach, Barbara Kalinowska, Leszek Konieczny, Irena Roterman.
Role of Disulfide Bonds in Stabilizing the Conformation of Selected Enzymes-An Approach Based on Divergence Entropy Applied to the Structure of Hydrophobic Core in Proteins.
Entropy
2016 : Vol. 18, nr 3 art. no. 67, s. 1-21, il., bibliogr. 29 poz., abstr.
Open Access Creative Commons Attribution License CC-BY 4.0.
p-ISSN: 1099-4300
AZ
ORG
AIF
IF: 1.821
Adres url:
7/22
Jacek Dygut, Barbara Kalinowska, Mateusz Banach, Monika Piwowar, Leszek Konieczny, Irena Roterman.
Structural Interface Forms and Their Involvement in Stabilization of Multidomain Proteins or Protein Complexes.
International Journal of Molecular Sciences
2016 : Vol. 17, nr 10 art. no. E1741, s. 1-21, il., bibliogr. 59 poz., abstr.
Open Access Creative Commons Attribution License CC BY 4.0.
p-ISSN: 1422-0067
AZ
ORG
AIF
IF: 3.226
Adres url:
Streszczenie w PubMed:
8/22
Barbara Kalinowska, Mateusz Banach, Leszek Konieczny, Irena Roterman.
Application of divergence entropy to characterize the structure of the hydrophobic core in DNA interacting proteins
Entropy
2015 : Vol. 17, nr 3, s. 1477-1507, il., bibliogr. 56 poz., abstr.
Open Access Creative Commons Attribution License CC-BY 4.0.
p-ISSN: 1099-4300
AZ
ORG
AIF
IF: 1.743
Adres url:
DOI:
9/22
Barbara Kalinowska, Artur Krzykalski, Irena Roterman.
Contingency Table Browser - prediction of early stage protein structure.
Bioinformation
2015 : Vol. 11, nr 10, s. 486-488, il., bibliogr. 10 poz., abstr.
Open Access Creative Commons Attribution License CC-BY.
p-ISSN: 0973-2063
AZ
ORG
APZ
BB: PubMed ; Web of Science
PubMed; Web of Science
Adres url:
Streszczenie w PubMed:
10/22
Mateusz Banach, Nicolas Prudhomme, Mathilde Carpentier, Elodie Duprat, Nikolaos Papandreou, Barbara Kalinowska, Jacques Chomilier, Irena Roterman.
Contribution to the prediction of the fold code: application to immunoglobulin and flavodoxin cases.
PLoS One
2015 : Vol. 10, nr 4 art. no. e0125098, s. 1-26, il., bibliogr. 84 poz., abstr.
Open Access Creative Commons Attribution License CC-BY 4.0.
p-ISSN: 1932-6203
AZ
ORG
AIF
IF: 3.057
Adres url:
Streszczenie w PubMed:
11/22
Barbara Kalinowska, Piotr Fabian, Katarzyna Stąpor, Irena Roterman.
Statistical dictionaries for hypothetical in silico model of the early-stage intermediate in protein folding.
Journal of Computer-Aided Molecular Design
2015 : Vol. 29, nr 7, s. 609-618, il., bibliogr. 33 poz., abstr.
Open Access Creative Commons Attribution License CC-BY.
p-ISSN: 0920-654X
AZ
ORG
AIF
IF: 3.199
Adres url:
Streszczenie w PubMed:
12/22
Mateusz Banach, Elodie Duprat, Mathilde Carpentier, Barbara Kalinowska, Irena Roterman, Jacques Chomilier.
Identification of the folding nucleus of globular protein: application to immunoglobulin-like and flavodoxin fold domains.
W: 13^th European Conference on Computational Biology : ECCB 2014, Strasbourg, France, 7-10 September, 2014 : program book.
: abstr. E28.
SZZ
AWZ
13/22
Barbara Kalinowska, Mateusz Banach, Leszek Konieczny, Damian Marchewka, Irena Roterman.
Intrinsically disordered proteins-relation to general model expressing the active role of the water environment.
Advances in Protein Chemistry and Structural Biology
2014 : Vol. 94, s. 315-346
p-ISSN: 1876-1623
AZ
ORG
AIF
IF: 3.036
DOI:
14/22
Małgorzata Tomanek, Irena Roterman, Mariusz Sterzel, Tomasz Szepieniec, Barbara Kalinowska, Zbigniew Baster, Dawid Dułak.
Protein Folding Simulations.
W: Seventh ACC Cyfronet AGH Users' Conference : KU KDM 2014, Zakopane, 12-14 Mar 2014 : proceedings.
ed. Kazimierz Wiatr, Jacek Kitowski, Marian Bubak.
Kraków : ACC Cyfronet AGH, 2014.
s. 59-60
p-ISBN: 978-83-61433-09-5
SZZ
AWZ
15/22
Irena Roterman, Mateusz Banach, Barbara Kalinowska, Leszek Konieczny.
Similar Structure - Different Stabilization - Analysis of Immunoglobulin-Like Domains.
W: 13^th European Conference on Computational Biology : ECCB 2014, Strasbourg, France, 7-10 September, 2014 : program book.
SZZ
AWZ
16/22
Barbara Kalinowska, Paweł Alejster, Kinga Sałapa, Zbigniew Baster, Irena Roterman.
Hypothetical in silico model of the early-stage intermediate in protein folding.
Journal of Molecular Modeling
2013 : Vol. 19, nr 10, s. 4259-4269, il., bibliogr., abstr.
Open Access Creative Commons Attribution License CC-BY.
p-ISSN: 1610-2940
e-ISSN: 0948-5023
AZ
ORG
AIF
IF: 1.867
Adres url:
Streszczenie w PubMed:
17/22
Barbara Kalinowska, Paweł Alejster, Kinga Sałapa, Zbigniew Baster, Irena Roterman.
In silico model of the early-stage intermediate in protein folding - analysis of structural predictability.
W: SocBin/BIT13, Torun, Poland, 26-29 June 2013 : book of abstracts
s. 74 : abstr. 22.
SZM
AWZ
18/22
Irena Roterman, Malgorzata Tomanek, Mariusz Sterzel, Tomasz Szepieniec, Barbara Kalinowska, Zbigniew Baster, Dawid Dułak.
Managing Protein Folding Process with Intelligent Process Parameters Adjustment.
W: Sixth ACC Cyfronet AGH Users' Conference, Zakopane, 28 February - 1 March 2013 : proceedings
eds. Kazimierz Wiatr, Jacek Kitowski, Marian Bubak.
Kraków : ACC Cyfronet AGH, cop. 2013
s. 9-11 : il., bibliogr. 14 poz.
24 cm.
: Zakopane, 2013.02.28
p-ISBN: 978-83-61433-07-1
SZM
19/22
Małgorzata Tomanek, Irena Roterman, Tomasz Szepieniec, Mariusz Sterzel, Barbara Kalinowska, Zbigniew Baster, Dawid Dułak.
Simulations in bioinformatics.
W: Cracow '13 Grid Workshop, November 4-6, 2013, Krakow, Poland : proceedings.
[eds] Marian Bubak, Michał Turała, Kazimierz Wiatr.
Kraków : Academic Computer Centre Cyfronet AGH, 2013
s. 41-42
24 cm.
p-ISBN: 978-83-61433-08-8
SZP
AWZ
20/22
Kinga Sałapa, Barbara Kalinowska, Tomasz Jadczyk, Irena Roterman.
Measurement of hydrophobicity distribution in proteins - complete redundant protein data bank.
Bio-Algorithms and Med-Systems
2012 : Vol. 8, nr 2, s. 196-206, il., bibliogr. 8 poz., abstr.
p-ISSN: 1896-530X
AP
ORG
KBN
21/22
Kinga Sałapa, Barbara Kalinowska, Tomasz Jadczyk, Irena Roterman.
Measurement of hydrophobicity distribution in proteins - non-redundant protein data bank.
Bio-Algorithms and Med-Systems
2012 : Vol. 8, nr 3, s. 327-338, il., bibliogr. 7 poz., abstr.
p-ISSN: 1896-530X
AP
ORG
KBN
22/22
Irena Roterman-Konieczna, Barbara Kalinowska, Zbigniew Baster.
Structural form for early stage protein folding process simulation.
W: Modeling & Design of Molecular Materials 2012, Wrocław, Poland, September 10-14, 2012 : conference information & abstracts
: abstr. P77B
SZM
AWZ
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