Bibliografia UJ CM

1/27
Małgorzata Gadzała, Dawid Dułak, Barbara Kalinowska, Zbigniew Baster, Michał Bryliński, Leszek Konieczny, Mateusz Banach, Irena Roterman.
The aqueous environment as an active participant in the protein folding process.
Journal of Molecular Graphics & Modelling
2019 : Vol. 87, s. 227-239, il., bibliogr. 73 poz., abstr.
Autor korespondencyjny: Dawid Dułak, Irena Roterman.
Open Access Creative Commons Attribution License CC-BY-NC-ND 4.0.
p-ISSN: 1093-3263
AZ
ORG
AIF
IF: 2.079
Adres url:
Streszczenie w PubMed:
2/27
Irena Roterman, Michal Brylinski, Leszek Konieczny.
Active site recognition in silico.
W: Structure-function relation in proteins / ed. Irena Roterman.
Trivandrum : Transworld Research Network, 2009
s. 105-127 : il., bibliogr. 67 poz., abstr.
RMZ
ORG
RMZ
3/27
Irena Roterman, Leszek Konieczny, Michal Brylinski.
Folding process in the presence of specific ligand.
W: Structure-function relation in proteins / ed. Irena Roterman.
Trivandrum : Transworld Research Network, 2009
s. 129-148 : il., bibliogr. 26 poz., abstr.
RMZ
ORG
RMZ
4/27
Irena Roterman, Leszek Konieczny, Michal Brylinski.
Late stage folding intermediate in silico model.
W: Structure-function relation in proteins / ed. Irena Roterman.
Trivandrum : Transworld Research Network, 2009
s. 79-103 : il., bibliogr. 48 poz., abstr.
RMZ
ORG
RMZ
5/27
Michal Brylinski, Leszek Konieczny, Andrzej Kononowicz, Irena Roterman.
Conservative secondary structure motifs already present in early-stage folding (in silico) as found in serpines family.
Journal of Theoretical Biology
2008 : Vol. 251, nr 2, s. 275-285, il., bibliogr., abstr.
p-ISSN: 0022-5193
AZ
ORG
AIF
IF: 2.454
6/27
I[rena] Roterman, M[ichał] Brylinski, L. Konieczny, W[iktor] Jurkowski.
Early-stage protein folding - In silico model.
W: Recent advances in structural bioinformatics / ed. Alexandre G. de Brever.
Trivandrum, Kerala, India : Research Signpost, 2007
s. 1-35 : il., bibliogr. 70 poz.
RMZ
ORG
RMZ
7/27
Michal Brylinski, Leszek Konieczny, Irena Roterman.
Is the protein folding an aim-oriented process? Human haemoglobin as example.
Int. J. Bioinformatics Res. Appl.
2007 : Vol. 3, nr 2, s. 234-260, il., bibliogr., abstr.
AZ
ORG
APZ
Adres url:
8/27
Michal Brylinski, Marek Kochanczyk, Elzbieta Broniatowska, Irena Roterman.
Localization of ligand binding site in proteins identified in silico.
Journal of Molecular Modeling
2007 : Vol. 13, nr 6-7, s. 665-675, il., bibliogr. 96 poz., abstr.
p-ISSN: 0949-183X
AZ
ORG
AIF
IF: 1.669
Adres url:
9/27
Michał Bryliński, Katarzyna Prymula, Wiktor Jurkowski, Marek Kochańczyk, Ewa Stawowczyk, Leszek Konieczny, Irena Roterman.
Prediction of functional sites based on the fuzzy oil drop model.
PLoS Comput. Biol.
2007 : Vol. 3, nr 5, s. 909-923, il., bibliogr. 80 poz.
p-ISSN: 1553-734X
AZ
ORG
AIF
IF: 6.236
Adres url:
10/27
Jan Meus, Michał Brylinski [Bryliński], Monika Piwowar, Piotr Piwowar, Zdzisław Wiśniowski, Justyna Stefaniak, Leszek Konieczny, Grzegorz Surówka, Irena Roterman.
A tabular approach to the sequence-to-structure relation in proteins (tetrapeptide representation) for de novo protein design.
Medical Science Monitor
2006 : Vol. 12, nr 6, s. BR208-214, il., bibliogr. 44 poz., summ.
AP
ORG
AIF
IF: 1.595
Adres url:
11/27
Irena Roterman, Michał Bryliński.
Co to jest bioinformatyka?
Pomiary, Autom., Kontr.
2006 : nr 5'bis wyd. spec. dodatkowe, s. 5-7, il., bibliogr. 12 poz., abstr., streszcz.
VIII Sympozjum Modelowanie i Pomiary w Medycynie, Krynica, 14-18 maja 2006 r.
RZP
POG
KBN
Adres url:
12/27
Michal Brylinski, Leszek Konieczny, Irena Roterman.
Fuzzy-oil-drop hydrophobic force field--a model to represent late-stage folding (in silico) of lysozyme.
Journal of Biomolecular Structure & Dynamics
2006 : Vol. 23, nr 5, s. 519-528, il., bibliogr., abstr.
AZ
ORG
AIF
IF: 1.299
Adres url:
13/27
Leszek Konieczny, Michal Brylinski, Irena Roterman.
Gauss-function-based model of hydrophobicity density in proteins.
In Silico Biol.
2006 : Vol. 6, nr 1-2, s. 15-22, il., bibliogr. 36 poz., abstr.
AZ
ORG
APZ
Adres url:
14/27
Michal Brylinski, Leszek Konieczny, Irena Roterman.
Hydrophobic collapse in (in silico) protein folding.
Comput. Biol. Chem.
2006 : Vol. 30, nr 4, s. 255-267, il., bibliogr., abstr.
AZ
ORG
AIF
IF: 2.135
15/27
Michal Brylinski, Leszek Konieczny, Irena Roterman.
Hydrophobic collapse in late-stage folding (in silico) of bovine pancreatic trypsin inhibitor.
Biochimie
2006 : Vol. 88, nr 9, s. 1229-1239, il., bibliogr. 91 poz., abstr.
AZ
ORG
AIF
IF: 3.237
Adres url:
16/27
Michal [Michał] Brylinski [Bryliński], Leszek Konieczny, Irena Roterman.
Ligation site in proteins recognized in silico.
Bioinformation
2006 : Vol. 1, nr 4, s. 127-129, il., bibliogr. 17 poz., abstr.
AZ
ORG
APZ
Adres url:
17/27
Michal [Michał] Brylinski [Bryliński], Marek Kochanczyk, Leszek Konieczny, Irena Roterman.
Sequence-structure-function relation characterized in silico.
In Silico Biol.
2006 : Vol. 6, nr 6, s. 589-600, il., bibliogr., abstr.
AZ
ORG
APZ
Adres url:
18/27
Irena Roterman, M[ichał] Bryliński, W[iktor] Jurkowski.
Simulation of protein folding process.
W: 3^rd Central european Conference Chemistry Towards Biology, Kraków, September 8^th-12^th, 2006
abstr. O-19 : bibliogr. 6 poz.
SZP
AWZ
19/27
Joanna Dabrowska, Michal Brylinski.
Stereoselectivity of 8-OH-DPAT toward the serotonin 5-HT_1A receptor : biochemical and molecular modeling study.
Biochemical Pharmacology
2006 : Vol. 72, nr 4, s. 498-511, il., bibliogr., abstr.
AZ
ORG
AIF
IF: 3.581
20/27
Michal Brylinski, Leszek Konieczny, Irena Roterman.
CASP6 - our best approach.
W: VI^th European Symposium of the Protein Society, Barcelona, 30 April - 4 May, 2005 : final program and abstracts
s. 94 : abstr. 05-5.
SZZ
AWZ
21/27
Irena Roterman, Leszek Konieczny, Michal Brylinski.
CASP6 - our worst approach.
W: VI^th European Symposium of the Protein Society, Barcelona, 30 April - 4 May, 2005 : final program and abstracts
s. 94 : abstr. 05-6.
SZZ
AWZ
22/27
Michal Brylinski, Leszek Konieczny, Patryk Czerwonko, Wiktor Jurkowski, Irena Roterman.
Early-stage folding in proteins (in silico) sequence-to-structure relation.
J. Biomed. Biotechnol.
2005 : Vol. 2005, nr 2, s. 65-79, il., bibliogr. 80 poz., abstr.
AZ
ORG
AIF
IF: 1.812
Adres url:
23/27
Michał Bryliński, Leszek Konieczny, Irena Roterman.
SPI - Structure predictability index for protein sequences.
In Silico Biol.
2005 : Vol. 5, nr 3, s. 227-237, il., bibliogr. 45 poz., abstr.
AZ
ORG
APZ
Adres url:
24/27
Wiktor Jurkowski, Michał Brylinski, Leszek Konieczny, Zdzisław Wiiniowski [Wiśniowski], Irena Roterman.
Conformational subspace in simulation of early-stage protein folding.
Proteins
2004 : Vol. 55, nr 1, s. 115-127, il., bibliogr. 35 poz., abstr.
AZ
ORG
AIF
IF: 4.429
Adres url:
25/27
Michał Bryliński, Wiktor Jurkowski, Leszek Konieczny, Irena Roterman.
Limitation of conformational space for proteins - early stage holding simulation of human α and β hemoglobin chains.
T.A.S.K. Q.
2004 : Vol. 8, nr 3, s. 413-422, bibliogr.
AP
ORG
KBN
26/27
M[ichał] Bryliński, W[iktor] Jurkowski, L[eszek] Konieczny, I[rena] Roterman.
Limited conformational space for early-stage protein folding simulation.
Bioinformatics
2004 : Vol. 20, nr 2, s. 199-205, il., bibliogr., abstr.
AZ
ORG
AIF
IF: 5.742
Adres url:
27/27
W[iktor] Jurkowski, M[ichał] Bryliński, L[eszek] Konieczny, I[rena] Roterman.
Lysozyme folded in silico according to the limited conformational sub-space.
Journal of Biomolecular Structure & Dynamics
2004 : Vol. 22, nr 2, s. 149-158, il., bibliogr., abstr.
AZ
ORG
AIF
IF: 1.113
Adres url:
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